Protein–RNA interactions for Protein: A6NCF5

KLHL33, Kelch-like protein 33, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL33A6NCF5 YBX1P5-201ENST00000509441 847 ntBASIC16.41■□□□□ 0.22
KLHL33A6NCF5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 AC092865.5-201ENST00000545435 363 ntBASIC16.41■□□□□ 0.22
KLHL33A6NCF5 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
KLHL33A6NCF5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 AL513523.2-202ENST00000427283 2040 ntBASIC16.4■□□□□ 0.22
KLHL33A6NCF5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 RPSAP43-201ENST00000402237 625 ntBASIC16.4■□□□□ 0.22
KLHL33A6NCF5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 HTR5BP-201ENST00000430851 1154 ntBASIC16.4■□□□□ 0.22
KLHL33A6NCF5 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 AKAP8P1-201ENST00000434743 1349 ntBASIC16.4■□□□□ 0.22
KLHL33A6NCF5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
KLHL33A6NCF5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
KLHL33A6NCF5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
KLHL33A6NCF5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 FAM58CP-201ENST00000435741 640 ntBASIC16.39■□□□□ 0.21
KLHL33A6NCF5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 AC091812.2-201ENST00000619081 385 ntBASIC16.39■□□□□ 0.21
KLHL33A6NCF5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 AC005252.3-201ENST00000623855 2258 ntBASIC16.39■□□□□ 0.21
KLHL33A6NCF5 AL671710.1-201ENST00000610245 2349 ntBASIC16.39■□□□□ 0.21
KLHL33A6NCF5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
KLHL33A6NCF5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
KLHL33A6NCF5 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
KLHL33A6NCF5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.38■□□□□ 0.21
KLHL33A6NCF5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms