Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 MIR346-201ENST00000362234 95 ntBASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 AL031055.1-201ENST00000606362 631 ntBASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 AL158211.3-201ENST00000607385 239 ntBASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 AP001350.2-201ENST00000625104 1094 ntBASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCDHGA3Q9Y5H0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA3Q9Y5H0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHGA3Q9Y5H0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 AC087641.1-201ENST00000557561 1021 ntBASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 OR6D1P-203ENST00000641209 4860 ntBASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 AC008677.1-201ENST00000519230 1561 ntBASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHGA3Q9Y5H0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 SLC25A39P2-201ENST00000537614 270 ntBASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 AP000842.3-202ENST00000569238 1080 ntBASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA3Q9Y5H0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms