Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 GPAA1P2-202ENST00000606848 1787 ntBASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RCL1Q9Y2P8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 SPDYE21P-201ENST00000413323 827 ntBASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 BX664615.1-201ENST00000443558 458 ntBASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 AC091607.1-201ENST00000490318 1060 ntBASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 AC090616.6-201ENST00000582640 721 ntBASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RCL1Q9Y2P8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RCL1Q9Y2P8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms