Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
HHLA3Q9XRX5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 PTCHD3P3-201ENST00000403073 906 ntBASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 KRT18P67-201ENST00000432816 1264 ntBASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 AF228730.7-201ENST00000641842 219 ntBASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HHLA3Q9XRX5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 AL596087.1-201ENST00000400979 1969 ntBASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 AP002414.1-201ENST00000391405 1147 ntBASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 GGTLC5P-201ENST00000617623 998 ntBASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 PGM5P2-202ENST00000637225 1043 ntBASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.01□□□□□ -0.49
HHLA3Q9XRX5 AC006504.4-201ENST00000592118 1568 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms