Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 AL671277.1-201ENST00000429656 993 ntBASIC17.23■□□□□ 0.35
SMG5Q9UPR3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 CRB3P1-201ENST00000449338 276 ntBASIC17.23■□□□□ 0.35
SMG5Q9UPR3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 STK19B-204ENST00000512515 211 ntBASIC17.23■□□□□ 0.35
SMG5Q9UPR3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 SLC25A39P2-201ENST00000537614 270 ntBASIC17.23■□□□□ 0.35
SMG5Q9UPR3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 AC109462.3-201ENST00000573934 613 ntBASIC17.23■□□□□ 0.35
SMG5Q9UPR3 AC027307.3-201ENST00000594262 1100 ntBASIC17.23■□□□□ 0.35
SMG5Q9UPR3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 AP001059.3-201ENST00000619053 235 ntBASIC17.23■□□□□ 0.35
SMG5Q9UPR3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMG5Q9UPR3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 AC105917.1-201ENST00000506637 2539 ntBASIC17.22■□□□□ 0.35
SMG5Q9UPR3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.22■□□□□ 0.35
SMG5Q9UPR3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.22■□□□□ 0.35
SMG5Q9UPR3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 FAM185BP-201ENST00000443595 716 ntBASIC17.22■□□□□ 0.35
SMG5Q9UPR3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 CR383656.12-201ENST00000549567 513 ntBASIC17.22■□□□□ 0.35
SMG5Q9UPR3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 FO538757.1-201ENST00000623083 1397 ntBASIC17.22■□□□□ 0.35
SMG5Q9UPR3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMG5Q9UPR3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.21■□□□□ 0.35
SMG5Q9UPR3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms