Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC6.5□□□□□ -1.37
MACF1Q9UPN3 AC138466.3-201ENST00000619983 221 ntBASIC6.5□□□□□ -1.37
MACF1Q9UPN3 AC079331.1-201ENST00000623200 1200 ntBASIC6.5□□□□□ -1.37
MACF1Q9UPN3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 HNRNPABP1-201ENST00000406003 734 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AL139010.1-201ENST00000454878 894 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AC020904.3-201ENST00000624199 442 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 RBM7-208ENST00000545678 867 ntTSL 3 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 MEG3_2.1-201ENST00000611456 105 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 ZACNP1-201ENST00000612259 710 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AP000997.3-201ENST00000623333 2250 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 LINC00634-202ENST00000505157 222 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SLC25A1P3-201ENST00000395415 828 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 AL589702.1-201ENST00000641229 1509 ntBASIC6.49□□□□□ -1.37
MACF1Q9UPN3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
MACF1Q9UPN3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 DNM1P48-201ENST00000419538 439 ntBASIC6.48□□□□□ -1.37
MACF1Q9UPN3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 AC106047.2-201ENST00000511723 743 ntBASIC6.48□□□□□ -1.37
MACF1Q9UPN3 URB1-AS1-201ENST00000534991 831 ntBASIC6.48□□□□□ -1.37
MACF1Q9UPN3 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 ISCA2P1-201ENST00000425548 448 ntBASIC6.48□□□□□ -1.37
MACF1Q9UPN3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC6.48□□□□□ -1.37
MACF1Q9UPN3 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms