Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 KRT8P48-201ENST00000515599 1220 ntBASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 AC105233.2-201ENST00000523697 349 ntBASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 AF228730.5-201ENST00000530288 346 ntBASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 AC243562.1-201ENST00000560672 389 ntBASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 AC027307.2-201ENST00000591252 911 ntBASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 AC008267.7-201ENST00000624570 1194 ntBASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP4E1Q9UPM8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
AP4E1Q9UPM8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.96■□□□□ 0.3
AP4E1Q9UPM8 ELL2P1-201ENST00000413990 1906 ntBASIC16.96■□□□□ 0.3
AP4E1Q9UPM8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4E1Q9UPM8 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.96■□□□□ 0.3
AP4E1Q9UPM8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP4E1Q9UPM8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.96■□□□□ 0.3
AP4E1Q9UPM8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 BX842568.4-201ENST00000421222 227 ntBASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 TIMM8BP1-201ENST00000452384 211 ntBASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 AC005829.1-201ENST00000570002 483 ntBASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 LINC02199-201ENST00000506655 2702 ntBASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.95■□□□□ 0.3
AP4E1Q9UPM8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 CEND1P1-201ENST00000451006 455 ntBASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 AC079140.1-201ENST00000508039 487 ntBASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 AC010327.4-202ENST00000591484 748 ntBASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP4E1Q9UPM8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms