Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHA4Q9UN74 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 HLA-J-203ENST00000494367 1087 ntBASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 GPALPP1-207ENST00000611650 899 ntBASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHA4Q9UN74 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 AL139400.1-201ENST00000366220 510 ntBASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 AP001059.3-201ENST00000619053 235 ntBASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 LINC00628-201ENST00000628516 1289 ntBASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHA4Q9UN74 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms