Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 AC009053.2-201ENST00000563701 2365 ntBASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 AC098850.1-201ENST00000419919 790 ntBASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 AC007389.4-201ENST00000454674 793 ntBASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 BNIP3P42-201ENST00000454982 569 ntBASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 SERBP1P3-201ENST00000459980 809 ntBASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 POU5F1P6-201ENST00000466990 990 ntBASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 BNIP3P29-201ENST00000598302 571 ntBASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 AC011447.5-201ENST00000616168 564 ntBASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.12■□□□□ 0.49
PDLIM7Q9NR12 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 AC005052.1-201ENST00000625181 2492 ntBASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 ANKRD19P-201ENST00000338192 862 ntBASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 MEP1AP4-201ENST00000423244 1087 ntBASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 AC004461.2-201ENST00000629517 803 ntBASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 AL109936.8-201ENST00000641772 604 ntBASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDLIM7Q9NR12 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 AL589987.1-201ENST00000453380 819 ntBASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 CROCCP4-201ENST00000457096 498 ntBASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 AC008735.3-201ENST00000596646 500 ntBASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDLIM7Q9NR12 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDLIM7Q9NR12 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms