Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AL671710.1-201ENST00000610245 2349 ntBASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 HTR5BP-201ENST00000430851 1154 ntBASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AP002490.2-201ENST00000524791 560 ntBASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 MIR3687-2-201ENST00000577708 61 ntBASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 MIR3687-1-201ENST00000614492 61 ntBASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AC091812.2-201ENST00000619081 385 ntBASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NECTIN3Q9NQS3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 AC005829.1-201ENST00000570002 483 ntBASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 AC055717.3-201ENST00000622967 595 ntBASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 SNX33P1-201ENST00000592116 1762 ntBASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NECTIN3Q9NQS3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NECTIN3Q9NQS3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NECTIN3Q9NQS3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.71■□□□□ 0.1
NECTIN3Q9NQS3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.7■□□□□ 0.1
NECTIN3Q9NQS3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms