Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 AF228730.6-201ENST00000641497 218 ntBASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 AC084121.3-201ENST00000641716 218 ntBASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 AC105233.6-201ENST00000642093 218 ntBASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.44□□□□□ -0.1
KIAA1549Q9HCM3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 RN7SL692P-201ENST00000464677 288 ntBASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AL513523.2-202ENST00000427283 2040 ntBASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AC005225.4-201ENST00000557330 545 ntBASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 AC044860.1-202ENST00000559481 777 ntBASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
KIAA1549Q9HCM3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
KIAA1549Q9HCM3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms