Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 AL139011.1-202ENST00000642063 584 ntBASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CLK4Q9HAZ1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 MTHFR-217ENST00000641820 1569 ntBASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 AL031432.2-201ENST00000566714 459 ntBASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 AL928711.1-201ENST00000570165 459 ntBASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 LINC00895-201ENST00000629028 1637 ntBASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLK4Q9HAZ1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 AC087641.1-201ENST00000557561 1021 ntBASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 MIR4492-201ENST00000581627 80 ntBASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 AC010507.1-201ENST00000633895 436 ntBASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLK4Q9HAZ1 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.96■□□□□ 0.14
CLK4Q9HAZ1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CLK4Q9HAZ1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.96■□□□□ 0.14
CLK4Q9HAZ1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLK4Q9HAZ1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CLK4Q9HAZ1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CLK4Q9HAZ1 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.96■□□□□ 0.14
CLK4Q9HAZ1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CLK4Q9HAZ1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLK4Q9HAZ1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms