Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 WASH6P-202ENST00000359512 1437 ntBASIC16.62■□□□□ 0.25
LRRC40Q9H9A6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 AC002056.1-201ENST00000395613 760 ntBASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 AC140113.2-201ENST00000604370 208 ntBASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 FAM197Y3-203ENST00000618346 717 ntBASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC40Q9H9A6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 AC010491.1-201ENST00000563101 2797 ntBASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 AC026396.1-201ENST00000419388 421 ntBASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 KRT18P3-201ENST00000451602 1288 ntBASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 AL513190.1-201ENST00000621254 727 ntBASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC40Q9H9A6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms