Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK3Q9H422 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HIPK3Q9H422 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 HIST3H2BA-201ENST00000436555 524 ntBASIC17.73■□□□□ 0.43
HIPK3Q9H422 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 GPR182-203ENST00000622922 591 ntBASIC17.73■□□□□ 0.43
HIPK3Q9H422 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK3Q9H422 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK3Q9H422 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 PDIA3P1-201ENST00000471856 1510 ntBASIC17.72■□□□□ 0.43
HIPK3Q9H422 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 KLF2P4-201ENST00000451959 1225 ntBASIC17.72■□□□□ 0.43
HIPK3Q9H422 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 RN7SL399P-201ENST00000471648 279 ntBASIC17.72■□□□□ 0.43
HIPK3Q9H422 SLC25A47P1-201ENST00000531577 414 ntBASIC17.72■□□□□ 0.43
HIPK3Q9H422 AL583810.1-201ENST00000553344 1045 ntBASIC17.72■□□□□ 0.43
HIPK3Q9H422 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 MIR6787-201ENST00000616675 61 ntBASIC17.72■□□□□ 0.43
HIPK3Q9H422 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.72■□□□□ 0.43
HIPK3Q9H422 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK3Q9H422 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 CYP4F24P-201ENST00000586049 1580 ntBASIC17.71■□□□□ 0.43
HIPK3Q9H422 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HIPK3Q9H422 KRT8P44-201ENST00000441609 1350 ntBASIC17.71■□□□□ 0.43
HIPK3Q9H422 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HIPK3Q9H422 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms