Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 AC004461.1-201ENST00000412461 403 ntBASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.17■□□□□ 0.02
UBQLN3Q9H347 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 RN7SL589P-201ENST00000481268 310 ntBASIC15.17■□□□□ 0.02
UBQLN3Q9H347 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.17■□□□□ 0.02
UBQLN3Q9H347 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
UBQLN3Q9H347 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 TFAMP1-201ENST00000412727 736 ntBASIC15.16■□□□□ 0.02
UBQLN3Q9H347 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 KRT8P48-201ENST00000515599 1220 ntBASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AL135744.1-201ENST00000565098 629 ntBASIC15.16■□□□□ 0.02
UBQLN3Q9H347 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AC004835.2-201ENST00000603762 682 ntBASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AC027612.4-201ENST00000605371 583 ntBASIC15.16■□□□□ 0.02
UBQLN3Q9H347 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 AL596087.1-201ENST00000400979 1969 ntBASIC15.16■□□□□ 0.02
UBQLN3Q9H347 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
UBQLN3Q9H347 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms