Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 MRPL20P1-201ENST00000400819 433 ntBASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 HAUS4P1-201ENST00000406739 1145 ntBASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 FAM185BP-201ENST00000443595 716 ntBASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 AC091304.2-201ENST00000564639 760 ntBASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 ACTL9-202ENST00000612068 1252 ntBASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 AC144831.1-201ENST00000573312 2656 ntBASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PHACTR1Q9C0D0 PPT1-215ENST00000641471 2368 ntBASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 DBET-201ENST00000630918 3363 ntBASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 OR7E14P-202ENST00000530490 1290 ntBASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 OR7E47P-204ENST00000575924 449 ntBASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 MIR1199-201ENST00000621445 119 ntBASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AC008735.5-201ENST00000623544 497 ntBASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AC073347.1-201ENST00000421633 2643 ntBASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.6■□□□□ 0.25
PHACTR1Q9C0D0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.59■□□□□ 0.25
PHACTR1Q9C0D0 AC093724.1-201ENST00000448659 1027 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms