Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 PMS2P4-201ENST00000412466 1052 ntBASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 LINC02084-201ENST00000606069 1096 ntBASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 HMGN1P19-201ENST00000436976 333 ntBASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 KRT18P2-201ENST00000447938 1258 ntBASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 AC034105.1-201ENST00000563488 319 ntBASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 AC106730.1-201ENST00000566722 1090 ntBASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 MIR3909-201ENST00000579518 119 ntBASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 AC112504.1-201ENST00000623415 1841 ntBASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPF3BQ9BZI7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPF3BQ9BZI7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
UPF3BQ9BZI7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPF3BQ9BZI7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPF3BQ9BZI7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
UPF3BQ9BZI7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 AC007967.2-201ENST00000432613 625 ntBASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 POLD2P1-201ENST00000511220 997 ntBASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.51■□□□□ 0.71
UPF3BQ9BZI7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms