Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 DAPK1-IT1-201ENST00000431813 702 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AL512286.1-201ENST00000439244 400 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 MRPL35P4-201ENST00000453682 566 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 RARRES2P1-201ENST00000474487 481 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC00888-204ENST00000487386 421 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC026427.2-201ENST00000506228 536 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 RPL30-209ENST00000521291 575 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 MS4A6A-217ENST00000533023 780 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 SETP17-201ENST00000534163 817 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 FCF1-202ENST00000534938 794 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC011603.2-204ENST00000547712 418 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 NMNAT1P5-201ENST00000559657 841 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC010525.1-201ENST00000585559 441 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC005070.1-201ENST00000603744 365 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AL035411.2-201ENST00000604022 421 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC007262.1-201ENST00000604099 321 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AL049634.3-201ENST00000604968 457 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC107464.3-201ENST00000609172 737 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC009154.2-201ENST00000621177 724 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC021106.3-201ENST00000623925 531 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC009033.1-201ENST00000624279 431 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC008993.1-201ENST00000632280 776 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 ANKRD62P1-201ENST00000434304 1623 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AP3S2-216ENST00000617003 1561 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 AL121603.2-201ENST00000557373 2117 ntBASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 FMO9P-201ENST00000477875 1364 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 VNN3-212ENST00000519686 1377 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
KRTAP3-3Q9BYR6 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 MTND5P16-201ENST00000460269 1703 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 ZNF833P-201ENST00000424938 1494 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 GAGE12H-201ENST00000381722 527 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 HP-204ENST00000398131 1252 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 GAGE12D-201ENST00000405679 527 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 SETP22-201ENST00000412243 957 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 RPS3AP37-201ENST00000419176 745 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 GAGE12C-201ENST00000420398 527 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 AL445528.1-201ENST00000426330 420 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 MTCO2P12-201ENST00000427426 682 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 BTF3P10-201ENST00000433415 495 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 PSMD4P1-201ENST00000433951 1109 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 GAGE12F-201ENST00000440137 527 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 GAGE12G-201ENST00000445148 527 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 SUN3-208ENST00000453192 801 ntTSL 5 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 HOMER2P1-201ENST00000455653 964 ntBASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC10.38□□□□□ -0.75
KRTAP3-3Q9BYR6 AC020779.1-201ENST00000478757 796 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms