Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 AL135744.1-201ENST00000565098 629 ntBASIC11.45□□□□□ -0.58
UPK3BQ9BT76 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 HYMAI-201ENST00000635591 3347 ntBASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 AC004461.1-201ENST00000412461 403 ntBASIC11.44□□□□□ -0.58
UPK3BQ9BT76 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 KRT8P23-201ENST00000560090 1207 ntBASIC11.44□□□□□ -0.58
UPK3BQ9BT76 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 AL139011.1-202ENST00000642063 584 ntBASIC11.44□□□□□ -0.58
UPK3BQ9BT76 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 AC006277.1-201ENST00000624348 1610 ntBASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
UPK3BQ9BT76 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms