Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.31■□□□□ 0.36
PAAF1Q9BRP4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.31■□□□□ 0.36
PAAF1Q9BRP4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.31■□□□□ 0.36
PAAF1Q9BRP4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PAAF1Q9BRP4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAAF1Q9BRP4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PAAF1Q9BRP4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.31■□□□□ 0.36
PAAF1Q9BRP4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 ME2P1-201ENST00000426028 1970 ntBASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 NME2P1-201ENST00000426182 414 ntBASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 AC027307.3-201ENST00000594262 1100 ntBASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 SRD5A3P1-201ENST00000603021 949 ntBASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PAAF1Q9BRP4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 AL353779.1-201ENST00000434793 351 ntBASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 WASH4P-201ENST00000564273 1246 ntBASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 MIR6069-201ENST00000620069 79 ntBASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PAAF1Q9BRP4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PAAF1Q9BRP4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms