Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 AC003669.1-201ENST00000334569 611 ntBASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 KLF4P1-201ENST00000412782 1185 ntBASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 HLA-F-220ENST00000434407 884 ntBASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 EGLN1P1-201ENST00000531623 762 ntBASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 GPR32P1-201ENST00000601788 811 ntBASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 AP001412.1-201ENST00000608405 714 ntBASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 PCGF3-213ENST00000620529 1899 ntBASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 AL359183.1-201ENST00000623796 2132 ntBASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SEC22CQ9BRL7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 AP002414.1-201ENST00000391405 1147 ntBASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 AC005840.4-201ENST00000541242 2494 ntBASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SEC22CQ9BRL7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SEC22CQ9BRL7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms