Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 AC100757.3-201ENST00000622361 1406 ntBASIC17.05■□□□□ 0.32
SMOQ99835 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMOQ99835 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMOQ99835 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SMOQ99835 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
SMOQ99835 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.05■□□□□ 0.32
SMOQ99835 AL080243.2-201ENST00000418783 582 ntBASIC17.05■□□□□ 0.32
SMOQ99835 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.05■□□□□ 0.32
SMOQ99835 AC245100.5-201ENST00000452108 331 ntBASIC17.05■□□□□ 0.32
SMOQ99835 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.05■□□□□ 0.32
SMOQ99835 SPCS2P1-201ENST00000561636 679 ntBASIC17.05■□□□□ 0.32
SMOQ99835 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.05■□□□□ 0.32
SMOQ99835 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.05■□□□□ 0.32
SMOQ99835 TEX28P1-201ENST00000613479 1221 ntBASIC17.05■□□□□ 0.32
SMOQ99835 TEX28P2-201ENST00000617764 1221 ntBASIC17.05■□□□□ 0.32
SMOQ99835 AL590560.3-201ENST00000623350 461 ntBASIC17.05■□□□□ 0.32
SMOQ99835 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.05■□□□□ 0.32
SMOQ99835 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SMOQ99835 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMOQ99835 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.05■□□□□ 0.32
SMOQ99835 AC006449.5-201ENST00000610658 2098 ntBASIC17.05■□□□□ 0.32
SMOQ99835 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMOQ99835 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.04■□□□□ 0.32
SMOQ99835 AL118508.1-201ENST00000613502 2345 ntBASIC17.04■□□□□ 0.32
SMOQ99835 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.04■□□□□ 0.32
SMOQ99835 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
SMOQ99835 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.04■□□□□ 0.32
SMOQ99835 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.04■□□□□ 0.32
SMOQ99835 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMOQ99835 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SMOQ99835 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.04■□□□□ 0.32
SMOQ99835 TSSK5P-201ENST00000423978 907 ntBASIC17.04■□□□□ 0.32
SMOQ99835 BASP1P1-201ENST00000430708 665 ntBASIC17.04■□□□□ 0.32
SMOQ99835 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 BCRP1-201ENST00000444246 691 ntBASIC17.04■□□□□ 0.32
SMOQ99835 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.04■□□□□ 0.32
SMOQ99835 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.04■□□□□ 0.32
SMOQ99835 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
SMOQ99835 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.04■□□□□ 0.32
SMOQ99835 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.04■□□□□ 0.32
SMOQ99835 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.04■□□□□ 0.32
SMOQ99835 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMOQ99835 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
SMOQ99835 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMOQ99835 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SMOQ99835 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMOQ99835 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 SPDYE17-201ENST00000412399 783 ntBASIC17.03■□□□□ 0.32
SMOQ99835 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.03■□□□□ 0.32
SMOQ99835 AC241585.1-201ENST00000433527 519 ntBASIC17.03■□□□□ 0.32
SMOQ99835 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.03■□□□□ 0.32
SMOQ99835 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.03■□□□□ 0.32
SMOQ99835 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.03■□□□□ 0.32
SMOQ99835 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMOQ99835 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.03■□□□□ 0.32
SMOQ99835 AL096865.1-201ENST00000606796 927 ntBASIC17.03■□□□□ 0.32
SMOQ99835 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.03■□□□□ 0.32
SMOQ99835 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.03■□□□□ 0.32
SMOQ99835 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.03■□□□□ 0.32
SMOQ99835 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMOQ99835 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms