Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.29■□□□□ 0.36
RAD9AQ99638 ENPP7P5-201ENST00000541031 1031 ntBASIC17.29■□□□□ 0.36
RAD9AQ99638 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 LINC01115-203ENST00000606068 577 ntBASIC17.29■□□□□ 0.36
RAD9AQ99638 AC244093.1-201ENST00000610837 814 ntBASIC17.29■□□□□ 0.36
RAD9AQ99638 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 AL158212.4-201ENST00000624062 1286 ntBASIC17.29■□□□□ 0.36
RAD9AQ99638 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.29■□□□□ 0.36
RAD9AQ99638 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
RAD9AQ99638 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RAD9AQ99638 GGT4P-201ENST00000623672 1708 ntBASIC17.29■□□□□ 0.36
RAD9AQ99638 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAD9AQ99638 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAD9AQ99638 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAD9AQ99638 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.28■□□□□ 0.36
RAD9AQ99638 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RAD9AQ99638 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD9AQ99638 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD9AQ99638 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD9AQ99638 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD9AQ99638 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD9AQ99638 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD9AQ99638 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD9AQ99638 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.28■□□□□ 0.36
RAD9AQ99638 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 U82695.1-201ENST00000635752 1889 ntBASIC17.28■□□□□ 0.36
RAD9AQ99638 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.28■□□□□ 0.36
RAD9AQ99638 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.28■□□□□ 0.36
RAD9AQ99638 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
RAD9AQ99638 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RAD9AQ99638 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAD9AQ99638 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.27■□□□□ 0.36
RAD9AQ99638 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.27■□□□□ 0.36
RAD9AQ99638 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD9AQ99638 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RAD9AQ99638 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD9AQ99638 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.27■□□□□ 0.36
RAD9AQ99638 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD9AQ99638 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD9AQ99638 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.27■□□□□ 0.36
RAD9AQ99638 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAD9AQ99638 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.27■□□□□ 0.36
RAD9AQ99638 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD9AQ99638 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.27■□□□□ 0.36
RAD9AQ99638 PTP4A1P2-201ENST00000546033 454 ntBASIC17.27■□□□□ 0.36
RAD9AQ99638 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.27■□□□□ 0.36
RAD9AQ99638 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD9AQ99638 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.27■□□□□ 0.36
RAD9AQ99638 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.27■□□□□ 0.36
RAD9AQ99638 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAD9AQ99638 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAD9AQ99638 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAD9AQ99638 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.27■□□□□ 0.35
RAD9AQ99638 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAD9AQ99638 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
RAD9AQ99638 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAD9AQ99638 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RAD9AQ99638 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms