Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.46■□□□□ 0.23
NDNQ99608 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.46■□□□□ 0.23
NDNQ99608 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.46■□□□□ 0.23
NDNQ99608 PRSS29P-201ENST00000440800 595 ntBASIC16.46■□□□□ 0.23
NDNQ99608 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.46■□□□□ 0.23
NDNQ99608 AL513480.1-201ENST00000451731 511 ntBASIC16.46■□□□□ 0.23
NDNQ99608 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.46■□□□□ 0.23
NDNQ99608 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.46■□□□□ 0.23
NDNQ99608 RNA5SP415-201ENST00000517246 115 ntBASIC16.46■□□□□ 0.23
NDNQ99608 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.46■□□□□ 0.23
NDNQ99608 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
NDNQ99608 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NDNQ99608 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.46■□□□□ 0.23
NDNQ99608 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NDNQ99608 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.46■□□□□ 0.22
NDNQ99608 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
NDNQ99608 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.45■□□□□ 0.22
NDNQ99608 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.45■□□□□ 0.22
NDNQ99608 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.45■□□□□ 0.22
NDNQ99608 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.45■□□□□ 0.22
NDNQ99608 LINC01144-201ENST00000626198 1710 ntBASIC16.45■□□□□ 0.22
NDNQ99608 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.45■□□□□ 0.22
NDNQ99608 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.45■□□□□ 0.22
NDNQ99608 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 HMGA1P7-201ENST00000406908 502 ntBASIC16.45■□□□□ 0.22
NDNQ99608 VN2R19P-201ENST00000442399 1052 ntBASIC16.45■□□□□ 0.22
NDNQ99608 AC093909.1-201ENST00000504731 1122 ntBASIC16.45■□□□□ 0.22
NDNQ99608 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.45■□□□□ 0.22
NDNQ99608 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.45■□□□□ 0.22
NDNQ99608 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NDNQ99608 MIR4515-201ENST00000584082 81 ntBASIC16.45■□□□□ 0.22
NDNQ99608 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.45■□□□□ 0.22
NDNQ99608 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
NDNQ99608 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
NDNQ99608 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.45■□□□□ 0.22
NDNQ99608 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
NDNQ99608 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.45■□□□□ 0.22
NDNQ99608 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.45■□□□□ 0.22
NDNQ99608 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.45■□□□□ 0.22
NDNQ99608 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.45■□□□□ 0.22
NDNQ99608 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NDNQ99608 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.45■□□□□ 0.22
NDNQ99608 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.44■□□□□ 0.22
NDNQ99608 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.44■□□□□ 0.22
NDNQ99608 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.44■□□□□ 0.22
NDNQ99608 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.44■□□□□ 0.22
NDNQ99608 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
NDNQ99608 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NDNQ99608 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.44■□□□□ 0.22
NDNQ99608 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.44■□□□□ 0.22
NDNQ99608 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.44■□□□□ 0.22
NDNQ99608 IGHV3-22-201ENST00000520721 359 ntBASIC16.44■□□□□ 0.22
NDNQ99608 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NDNQ99608 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.44■□□□□ 0.22
NDNQ99608 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NDNQ99608 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
NDNQ99608 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms