Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.11□□□□□ -0.31
RNF2Q99496 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RNF2Q99496 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF2Q99496 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RNF2Q99496 AC126177.1-201ENST00000547829 2218 ntBASIC13.11□□□□□ -0.31
RNF2Q99496 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RNF2Q99496 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF2Q99496 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
RNF2Q99496 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 GGT3P-204ENST00000453783 1664 ntBASIC13.1□□□□□ -0.31
RNF2Q99496 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.1□□□□□ -0.31
RNF2Q99496 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.1□□□□□ -0.31
RNF2Q99496 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
RNF2Q99496 SCARNA2-201ENST00000458748 420 ntBASIC13.1□□□□□ -0.31
RNF2Q99496 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 AL022326.1-202ENST00000641533 845 ntBASIC13.1□□□□□ -0.31
RNF2Q99496 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RNF2Q99496 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF2Q99496 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.1□□□□□ -0.31
RNF2Q99496 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RNF2Q99496 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RNF2Q99496 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.1□□□□□ -0.31
RNF2Q99496 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RNF2Q99496 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF2Q99496 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RNF2Q99496 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RNF2Q99496 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
RNF2Q99496 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF2Q99496 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF2Q99496 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF2Q99496 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RNF2Q99496 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF2Q99496 PRYP5-201ENST00000451909 266 ntBASIC13.09□□□□□ -0.31
RNF2Q99496 EMBP1-201ENST00000458200 901 ntBASIC13.09□□□□□ -0.31
RNF2Q99496 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.09□□□□□ -0.31
RNF2Q99496 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 SART3-203ENST00000546611 1184 ntBASIC13.09□□□□□ -0.31
RNF2Q99496 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.09□□□□□ -0.31
RNF2Q99496 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF2Q99496 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RNF2Q99496 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.09□□□□□ -0.31
RNF2Q99496 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 AC104581.4-201ENST00000623126 3052 ntBASIC13.09□□□□□ -0.31
RNF2Q99496 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RNF2Q99496 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.09□□□□□ -0.31
RNF2Q99496 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RNF2Q99496 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.08□□□□□ -0.31
RNF2Q99496 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.08□□□□□ -0.31
RNF2Q99496 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RNF2Q99496 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RNF2Q99496 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms