Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 PCED1CP-201ENST00000419887 785 ntBASIC13.31□□□□□ -0.28
RAB40CQ96S21 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 BX276092.5-203ENST00000456199 560 ntBASIC13.31□□□□□ -0.28
RAB40CQ96S21 MINOS1P3-201ENST00000457048 203 ntBASIC13.31□□□□□ -0.28
RAB40CQ96S21 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 AC091607.1-201ENST00000490318 1060 ntBASIC13.31□□□□□ -0.28
RAB40CQ96S21 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 AC020658.6-201ENST00000623564 1870 ntBASIC13.31□□□□□ -0.28
RAB40CQ96S21 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 AC092919.2-201ENST00000623631 1645 ntBASIC13.31□□□□□ -0.28
RAB40CQ96S21 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.31□□□□□ -0.28
RAB40CQ96S21 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RAB40CQ96S21 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 AC006486.2-201ENST00000624246 2199 ntBASIC13.3□□□□□ -0.28
RAB40CQ96S21 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 AL445228.2-201ENST00000605589 952 ntBASIC13.3□□□□□ -0.28
RAB40CQ96S21 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 AC116407.4-201ENST00000623319 1061 ntBASIC13.3□□□□□ -0.28
RAB40CQ96S21 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RAB40CQ96S21 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB40CQ96S21 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms