Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 AC018845.2-201ENST00000568326 409 ntBASIC15.51■□□□□ 0.07
COL21A1Q96P44 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.51■□□□□ 0.07
COL21A1Q96P44 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 AC023141.13-201ENST00000604991 943 ntBASIC15.51■□□□□ 0.07
COL21A1Q96P44 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COL21A1Q96P44 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.51■□□□□ 0.07
COL21A1Q96P44 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 AC012569.1-201ENST00000591191 1524 ntBASIC15.5■□□□□ 0.07
COL21A1Q96P44 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 POLD2P1-201ENST00000511220 997 ntBASIC15.5■□□□□ 0.07
COL21A1Q96P44 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 AC087641.1-201ENST00000557561 1021 ntBASIC15.5■□□□□ 0.07
COL21A1Q96P44 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 MIR4515-201ENST00000584082 81 ntBASIC15.5■□□□□ 0.07
COL21A1Q96P44 CYP2A7P1-201ENST00000595391 815 ntBASIC15.5■□□□□ 0.07
COL21A1Q96P44 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 AL645728.2-201ENST00000641974 660 ntBASIC15.5■□□□□ 0.07
COL21A1Q96P44 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 SLC22A20-204ENST00000530038 1673 ntBASIC15.5■□□□□ 0.07
COL21A1Q96P44 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
COL21A1Q96P44 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COL21A1Q96P44 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 BCAR1-209ENST00000546196 1340 ntBASIC15.49■□□□□ 0.07
COL21A1Q96P44 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.49■□□□□ 0.07
COL21A1Q96P44 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 AC004877.2-201ENST00000623941 599 ntBASIC15.49■□□□□ 0.07
COL21A1Q96P44 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.49■□□□□ 0.07
COL21A1Q96P44 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COL21A1Q96P44 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
COL21A1Q96P44 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
COL21A1Q96P44 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms