Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 AC007541.1-201ENST00000570282 1469 ntBASIC18.93■□□□□ 0.62
CCDC17Q96LX7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 EEF1DP4-201ENST00000446006 880 ntBASIC18.93■□□□□ 0.62
CCDC17Q96LX7 AP005018.1-201ENST00000525475 301 ntBASIC18.93■□□□□ 0.62
CCDC17Q96LX7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 AL132655.2-201ENST00000596276 594 ntBASIC18.93■□□□□ 0.62
CCDC17Q96LX7 AC012645.4-201ENST00000610691 1061 ntBASIC18.93■□□□□ 0.62
CCDC17Q96LX7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 AC063926.2-201ENST00000623766 1308 ntBASIC18.93■□□□□ 0.62
CCDC17Q96LX7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 AL391825.1-201ENST00000457671 1364 ntBASIC18.93■□□□□ 0.62
CCDC17Q96LX7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 DFFBP1-201ENST00000433250 979 ntBASIC18.92■□□□□ 0.62
CCDC17Q96LX7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 AC093004.1-201ENST00000508850 424 ntBASIC18.92■□□□□ 0.62
CCDC17Q96LX7 DOC2GP-202ENST00000514950 1163 ntBASIC18.92■□□□□ 0.62
CCDC17Q96LX7 API5-211ENST00000534695 560 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 TP53TG3HP-202ENST00000569755 579 ntBASIC18.92■□□□□ 0.62
CCDC17Q96LX7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 SRD5A3P1-201ENST00000603021 949 ntBASIC18.92■□□□□ 0.62
CCDC17Q96LX7 AC004461.2-201ENST00000629517 803 ntBASIC18.92■□□□□ 0.62
CCDC17Q96LX7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 ALOX12P2-203ENST00000570921 1945 ntBASIC18.92■□□□□ 0.62
CCDC17Q96LX7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC17Q96LX7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 GNAQP1-201ENST00000444815 1067 ntBASIC18.91■□□□□ 0.62
CCDC17Q96LX7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 AC025048.3-201ENST00000590609 569 ntBASIC18.91■□□□□ 0.62
CCDC17Q96LX7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 AC005702.4-201ENST00000618393 416 ntBASIC18.91■□□□□ 0.62
CCDC17Q96LX7 AL109936.8-201ENST00000641772 604 ntBASIC18.91■□□□□ 0.62
CCDC17Q96LX7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 AC092171.3-201ENST00000610122 2651 ntBASIC18.91■□□□□ 0.62
CCDC17Q96LX7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC17Q96LX7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms