Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 AC007191.1-201ENST00000623179 2995 ntBASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 LINC00552-201ENST00000625151 2579 ntBASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CLPTM1LQ96KA5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 LINC00528-201ENST00000600723 2160 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 TSPY22P-201ENST00000427496 604 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 LIN28AP1-201ENST00000429574 405 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 ATP5G1P1-201ENST00000448724 379 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 IGHV3-41-201ENST00000613121 348 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 AL590326.2-201ENST00000625139 305 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
CLPTM1LQ96KA5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms