Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIPA1Q96FS4 KRT8P12-202ENST00000472924 1397 ntBASIC16.35■□□□□ 0.21
SIPA1Q96FS4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIPA1Q96FS4 PCGF3-213ENST00000620529 1899 ntBASIC16.35■□□□□ 0.21
SIPA1Q96FS4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SIPA1Q96FS4 CU639417.3-201ENST00000624240 1404 ntBASIC16.35■□□□□ 0.21
SIPA1Q96FS4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIPA1Q96FS4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIPA1Q96FS4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.35■□□□□ 0.21
SIPA1Q96FS4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.35■□□□□ 0.21
SIPA1Q96FS4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SIPA1Q96FS4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 AL139010.1-201ENST00000454878 894 ntBASIC16.34■□□□□ 0.21
SIPA1Q96FS4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 AL033527.5-202ENST00000641632 1098 ntBASIC16.34■□□□□ 0.21
SIPA1Q96FS4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 PKD1P5-201ENST00000532415 10291 ntBASIC16.34■□□□□ 0.21
SIPA1Q96FS4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.34■□□□□ 0.21
SIPA1Q96FS4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
SIPA1Q96FS4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
SIPA1Q96FS4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 AC087499.6-201ENST00000411576 835 ntBASIC16.33■□□□□ 0.2
SIPA1Q96FS4 SPDYE17-201ENST00000412399 783 ntBASIC16.33■□□□□ 0.2
SIPA1Q96FS4 DFFBP1-201ENST00000433250 979 ntBASIC16.33■□□□□ 0.2
SIPA1Q96FS4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 DOC2GP-202ENST00000514950 1163 ntBASIC16.33■□□□□ 0.2
SIPA1Q96FS4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.33■□□□□ 0.2
SIPA1Q96FS4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SIPA1Q96FS4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms