Protein–RNA interactions for Protein: Q96DV4

MRPL38, 39S ribosomal protein L38, mitochondrial, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38Q96DV4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.9■□□□□ 0.3
MRPL38Q96DV4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRPL38Q96DV4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
MRPL38Q96DV4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.89■□□□□ 0.3
MRPL38Q96DV4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MRPL38Q96DV4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 PCGF3-213ENST00000620529 1899 ntBASIC16.89■□□□□ 0.29
MRPL38Q96DV4 HTR7P1-202ENST00000624664 4411 ntBASIC16.89■□□□□ 0.29
MRPL38Q96DV4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 TOMM22P5-201ENST00000416399 439 ntBASIC16.89■□□□□ 0.29
MRPL38Q96DV4 AC074338.1-201ENST00000416825 156 ntBASIC16.89■□□□□ 0.29
MRPL38Q96DV4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 AC106760.1-201ENST00000508690 800 ntBASIC16.89■□□□□ 0.29
MRPL38Q96DV4 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 FAM86HP-204ENST00000513466 959 ntBASIC16.89■□□□□ 0.29
MRPL38Q96DV4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 AL049840.4-201ENST00000602422 811 ntBASIC16.89■□□□□ 0.29
MRPL38Q96DV4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MRPL38Q96DV4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 TARDBPP1-201ENST00000442013 1203 ntBASIC16.88■□□□□ 0.29
MRPL38Q96DV4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 IGHJ2P-201ENST00000454480 60 ntBASIC16.88■□□□□ 0.29
MRPL38Q96DV4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MRPL38Q96DV4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 AL691432.1-201ENST00000596308 1422 ntBASIC16.87■□□□□ 0.29
MRPL38Q96DV4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MRPL38Q96DV4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms