Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 AC079328.2-201ENST00000561241 3354 ntBASIC14.49□□□□□ -0.09
APH1AQ96BI3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 PCDHA14-201ENST00000506751 2298 ntBASIC14.49□□□□□ -0.09
APH1AQ96BI3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APH1AQ96BI3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APH1AQ96BI3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.48□□□□□ -0.09
APH1AQ96BI3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 AL589702.1-201ENST00000641229 1509 ntBASIC14.48□□□□□ -0.09
APH1AQ96BI3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 SPDYE7P-202ENST00000420373 878 ntBASIC14.48□□□□□ -0.09
APH1AQ96BI3 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APH1AQ96BI3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APH1AQ96BI3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APH1AQ96BI3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
APH1AQ96BI3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APH1AQ96BI3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
APH1AQ96BI3 AC005052.1-201ENST00000625181 2492 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
APH1AQ96BI3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 AL139400.1-201ENST00000366220 510 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
APH1AQ96BI3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 GPS2P2-201ENST00000430745 888 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 RNA5SP410-201ENST00000516285 106 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 AC026150.2-201ENST00000564693 1156 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 RARRES2P9-201ENST00000565168 469 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 AC024267.1-201ENST00000582320 895 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.47□□□□□ -0.09
APH1AQ96BI3 AP001059.3-201ENST00000619053 235 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 AC093028.1-201ENST00000622998 982 ntBASIC14.47□□□□□ -0.09
APH1AQ96BI3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APH1AQ96BI3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms