Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 MIR3909-201ENST00000579518 119 ntBASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 CLEC4GP1-201ENST00000596555 870 ntBASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC44A1Q8WWI5 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC44A1Q8WWI5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 AC136621.1-201ENST00000624017 2304 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 MRPL20P1-201ENST00000400819 433 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 HMGA1P7-201ENST00000406908 502 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 KRT126P-201ENST00000549467 1181 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 AL031055.1-201ENST00000606362 631 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 AC012313.10-201ENST00000623509 926 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 AC023157.3-201ENST00000619086 2088 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 TNRC18P2-201ENST00000417666 2714 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC44A1Q8WWI5 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 MIR1199-201ENST00000621445 119 ntBASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 AC008735.5-201ENST00000623544 497 ntBASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC44A1Q8WWI5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms