Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 AC112191.1-201ENST00000523689 701 ntBASIC15.32■□□□□ 0.04
NUP43Q8NFH3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 AL603832.2-201ENST00000566195 2125 ntBASIC15.32■□□□□ 0.04
NUP43Q8NFH3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NUP43Q8NFH3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 AL365203.3-201ENST00000609742 2057 ntBASIC15.31■□□□□ 0.04
NUP43Q8NFH3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 MIR940-201ENST00000401276 94 ntBASIC15.31■□□□□ 0.04
NUP43Q8NFH3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NUP43Q8NFH3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 AC023274.1-201ENST00000418278 595 ntBASIC15.3■□□□□ 0.04
NUP43Q8NFH3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 AC073439.1-201ENST00000624121 1774 ntBASIC15.3■□□□□ 0.04
NUP43Q8NFH3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NUP43Q8NFH3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NUP43Q8NFH3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms