Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 PMS2P7-201ENST00000506558 1336 ntBASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 BX842568.4-201ENST00000421222 227 ntBASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 AC104640.1-201ENST00000562617 2109 ntBASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 AC040169.1-201ENST00000565382 521 ntBASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 AC099522.2-201ENST00000607001 744 ntBASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SIMC1Q8NDZ2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 AC016027.1-202ENST00000607927 1699 ntBASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 PMS2P4-201ENST00000412466 1052 ntBASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 AL078644.1-201ENST00000609881 752 ntBASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 AC091812.2-201ENST00000619081 385 ntBASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SIMC1Q8NDZ2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SIMC1Q8NDZ2 ALG1L5P-201ENST00000482043 771 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms