Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
ARHGEF39Q8N4T4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 AL136982.4-201ENST00000437689 1740 ntBASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 AL080243.2-201ENST00000418783 582 ntBASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 AL138828.2-201ENST00000615812 383 ntBASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 AC092364.2-201ENST00000596710 2692 ntBASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ARHGEF39Q8N4T4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AL118508.1-201ENST00000613502 2345 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AC084018.2-201ENST00000613093 2607 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AC006449.5-201ENST00000610658 2098 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 MIR770-201ENST00000390219 98 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 RPL37AP1-201ENST00000412502 279 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 TSSK5P-201ENST00000423978 907 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AL079307.3-201ENST00000556114 283 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AC073592.8-201ENST00000624126 511 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ARHGEF39Q8N4T4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ARHGEF39Q8N4T4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
ARHGEF39Q8N4T4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ARHGEF39Q8N4T4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ARHGEF39Q8N4T4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms