Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.32■□□□□ 0.04
DEPDC4Q8N2C3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 SLC25A6P4-201ENST00000586535 553 ntBASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
DEPDC4Q8N2C3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AP002414.1-201ENST00000391405 1147 ntBASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 RNPS1P1-201ENST00000507437 918 ntBASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AC010491.1-201ENST00000563101 2797 ntBASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AP001269.4-201ENST00000609611 512 ntBASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AD001527.2-201ENST00000622994 785 ntBASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AL139288.1-201ENST00000623748 933 ntBASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 AC073592.5-201ENST00000624854 528 ntBASIC15.3■□□□□ 0.04
DEPDC4Q8N2C3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms