Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H3Q8IXZ2 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AC132872.4-202ENST00000622924 2756 ntBASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 PAUPAR-201ENST00000630360 2965 ntBASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 HLA-H-201ENST00000383620 1096 ntBASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 AC022145.2-201ENST00000598203 171 ntBASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZC3H3Q8IXZ2 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 BNIP3P1-202ENST00000550043 1585 ntBASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 TIMM8BP1-201ENST00000452384 211 ntBASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 SLC25A39P2-201ENST00000537614 270 ntBASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 AL513210.1-201ENST00000629608 234 ntBASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
ZC3H3Q8IXZ2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 AC243562.2-201ENST00000561247 970 ntBASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 AC055717.3-201ENST00000622967 595 ntBASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 AP3S2-216ENST00000617003 1561 ntBASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ZC3H3Q8IXZ2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms