Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 AL603756.1-201ENST00000606511 2163 ntBASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 MIR658-201ENST00000385210 100 ntBASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 RPS2P32-201ENST00000439199 892 ntBASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 AC025048.3-201ENST00000590609 569 ntBASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 AC074044.1-201ENST00000609673 707 ntBASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 AC005702.4-201ENST00000618393 416 ntBASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 AC006538.1-201ENST00000567905 1585 ntBASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
NPAS3Q8IXF0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 PCGF3-213ENST00000620529 1899 ntBASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 AP001094.4-201ENST00000579008 2176 ntBASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPAS3Q8IXF0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms