Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC50Q8IVM0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 HCG4-201ENST00000418983 998 ntBASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 FAM197Y8-203ENST00000450145 560 ntBASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 UNC93B7-201ENST00000509439 705 ntBASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 AC126177.1-201ENST00000547829 2218 ntBASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 AL356488.2-201ENST00000602755 427 ntBASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 AC008667.4-201ENST00000607370 168 ntBASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 AC008735.5-201ENST00000623544 497 ntBASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC50Q8IVM0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC50Q8IVM0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC50Q8IVM0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC50Q8IVM0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC50Q8IVM0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC50Q8IVM0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC50Q8IVM0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CCDC50Q8IVM0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC50Q8IVM0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 DUSP5P1-201ENST00000441325 1139 ntBASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 TP73-AS1-207ENST00000624167 988 ntBASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC50Q8IVM0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms