Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC004877.2-201ENST00000623941 599 ntBASIC17.04■□□□□ 0.32
RFX6Q8HWS3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 AC025580.3-201ENST00000617932 1424 ntBASIC17.04■□□□□ 0.32
RFX6Q8HWS3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX6Q8HWS3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 AL592424.1-201ENST00000563624 1536 ntBASIC17.03■□□□□ 0.32
RFX6Q8HWS3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 RPL13AP23-201ENST00000480739 586 ntBASIC17.03■□□□□ 0.32
RFX6Q8HWS3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 AC145285.3-201ENST00000564603 959 ntBASIC17.03■□□□□ 0.32
RFX6Q8HWS3 AL121894.2-201ENST00000602977 491 ntBASIC17.03■□□□□ 0.32
RFX6Q8HWS3 AL009183.1-201ENST00000603760 355 ntBASIC17.03■□□□□ 0.32
RFX6Q8HWS3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RFX6Q8HWS3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 U82695.1-201ENST00000635752 1889 ntBASIC17.02■□□□□ 0.32
RFX6Q8HWS3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.02■□□□□ 0.32
RFX6Q8HWS3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms