Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 AC140878.1-201ENST00000565277 250 ntBASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 REXO1L8P-201ENST00000604378 1897 ntBASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRRTM4Q86VH4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 TNRC18P3-201ENST00000441896 2691 ntBASIC16■□□□□ 0.15
LRRTM4Q86VH4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 MIR4321-201ENST00000592276 80 ntBASIC16■□□□□ 0.15
LRRTM4Q86VH4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16■□□□□ 0.15
LRRTM4Q86VH4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16■□□□□ 0.15
LRRTM4Q86VH4 AL035456.1-201ENST00000456064 1369 ntBASIC16■□□□□ 0.15
LRRTM4Q86VH4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 AC069120.2-201ENST00000524091 540 ntBASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 DUX4L27-201ENST00000554796 1261 ntBASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 AL355385.1-201ENST00000606123 409 ntBASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRTM4Q86VH4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms