Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 SLED1-202ENST00000512051 380 ntBASIC16.52■□□□□ 0.23
DENND4AQ7Z401 HNRNPUP1-201ENST00000554987 333 ntBASIC16.52■□□□□ 0.23
DENND4AQ7Z401 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.52■□□□□ 0.23
DENND4AQ7Z401 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.52■□□□□ 0.23
DENND4AQ7Z401 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
DENND4AQ7Z401 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
DENND4AQ7Z401 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.52■□□□□ 0.23
DENND4AQ7Z401 FZD10-202ENST00000539839 3282 ntBASIC16.52■□□□□ 0.23
DENND4AQ7Z401 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.52■□□□□ 0.23
DENND4AQ7Z401 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
DENND4AQ7Z401 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
DENND4AQ7Z401 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 AC006538.1-201ENST00000567905 1585 ntBASIC16.51■□□□□ 0.23
DENND4AQ7Z401 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 AC005622.1-201ENST00000636801 1703 ntBASIC16.51■□□□□ 0.23
DENND4AQ7Z401 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 PFN1P12-201ENST00000455938 534 ntBASIC16.51■□□□□ 0.23
DENND4AQ7Z401 AC007551.1-201ENST00000457394 519 ntBASIC16.51■□□□□ 0.23
DENND4AQ7Z401 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 RPL13AP25-201ENST00000484130 612 ntBASIC16.51■□□□□ 0.23
DENND4AQ7Z401 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 AC107373.2-201ENST00000607735 490 ntBASIC16.51■□□□□ 0.23
DENND4AQ7Z401 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.51■□□□□ 0.23
DENND4AQ7Z401 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
DENND4AQ7Z401 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AC007969.1-201ENST00000433675 447 ntBASIC16.5■□□□□ 0.23
DENND4AQ7Z401 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 FAM86HP-204ENST00000513466 959 ntBASIC16.5■□□□□ 0.23
DENND4AQ7Z401 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AC010328.2-201ENST00000597698 1111 ntBASIC16.5■□□□□ 0.23
DENND4AQ7Z401 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 BAATP1-201ENST00000412284 1225 ntBASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 RPL13AP20-201ENST00000459725 609 ntBASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AC022137.2-201ENST00000503482 481 ntBASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
DENND4AQ7Z401 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 AL691432.1-201ENST00000596308 1422 ntBASIC16.49■□□□□ 0.23
DENND4AQ7Z401 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 AC105020.1-201ENST00000435356 2205 ntBASIC16.49■□□□□ 0.23
DENND4AQ7Z401 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 AC004987.2-201ENST00000395959 1148 ntBASIC16.49■□□□□ 0.23
DENND4AQ7Z401 GPAA1P2-201ENST00000417923 928 ntBASIC16.49■□□□□ 0.23
DENND4AQ7Z401 AC026954.1-201ENST00000429771 1293 ntBASIC16.49■□□□□ 0.23
DENND4AQ7Z401 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DENND4AQ7Z401 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms