Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHFQ7M4L6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHFQ7M4L6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHFQ7M4L6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SHFQ7M4L6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.83□□□□□ -0.03
SHFQ7M4L6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
SHFQ7M4L6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.83□□□□□ -0.03
SHFQ7M4L6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
SHFQ7M4L6 PPT1-215ENST00000641471 2368 ntBASIC14.83□□□□□ -0.03
SHFQ7M4L6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHFQ7M4L6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SHFQ7M4L6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
SHFQ7M4L6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AC087163.2-201ENST00000457299 853 ntBASIC14.83□□□□□ -0.04
SHFQ7M4L6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AC091167.2-201ENST00000579581 588 ntBASIC14.83□□□□□ -0.04
SHFQ7M4L6 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.83□□□□□ -0.04
SHFQ7M4L6 MTDHP4-201ENST00000600287 670 ntBASIC14.83□□□□□ -0.04
SHFQ7M4L6 AL445228.2-201ENST00000605589 952 ntBASIC14.83□□□□□ -0.04
SHFQ7M4L6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AC131009.4-201ENST00000624048 1740 ntBASIC14.83□□□□□ -0.04
SHFQ7M4L6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SHFQ7M4L6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 PMS2P1-201ENST00000431037 1228 ntBASIC14.82□□□□□ -0.04
SHFQ7M4L6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 KRT18P31-201ENST00000506277 1292 ntBASIC14.82□□□□□ -0.04
SHFQ7M4L6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms