Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 C8orf49-201ENST00000525043 1968 ntBASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXR1Q6PIV2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 Z83851.2-201ENST00000609564 659 ntBASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 PPP1R26P4-201ENST00000619065 3527 ntBASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXR1Q6PIV2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 AC005840.4-201ENST00000541242 2494 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 AC005089.1-201ENST00000619486 2241 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 AC007967.2-201ENST00000432613 625 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 KRT18P3-201ENST00000451602 1288 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 PGAM5P1-201ENST00000518923 814 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 AC145285.3-201ENST00000564603 959 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 MIR3687-2-201ENST00000577708 61 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 MTDHP4-201ENST00000600287 670 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 AL139424.1-201ENST00000607572 797 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 MIR3687-1-201ENST00000614492 61 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 FAM197Y3-203ENST00000618346 717 ntBASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXR1Q6PIV2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms