Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 U82695.1-201ENST00000635752 1889 ntBASIC19.38■□□□□ 0.69
CTR9Q6PD62 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
CTR9Q6PD62 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CTR9Q6PD62 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 POU5F1P6-201ENST00000466990 990 ntBASIC19.37■□□□□ 0.69
CTR9Q6PD62 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 AC024267.1-201ENST00000582320 895 ntBASIC19.37■□□□□ 0.69
CTR9Q6PD62 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 AL096865.1-201ENST00000606796 927 ntBASIC19.37■□□□□ 0.69
CTR9Q6PD62 RN7SL828P-201ENST00000607615 303 ntBASIC19.37■□□□□ 0.69
CTR9Q6PD62 AL133215.2-201ENST00000609242 977 ntBASIC19.37■□□□□ 0.69
CTR9Q6PD62 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CTR9Q6PD62 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CTR9Q6PD62 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 SPDYE12P-201ENST00000618416 771 ntBASIC19.36■□□□□ 0.69
CTR9Q6PD62 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.36■□□□□ 0.69
CTR9Q6PD62 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CTR9Q6PD62 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CTR9Q6PD62 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 AL035456.1-201ENST00000456064 1369 ntBASIC19.35■□□□□ 0.69
CTR9Q6PD62 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.35■□□□□ 0.69
CTR9Q6PD62 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.35■□□□□ 0.69
CTR9Q6PD62 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CTR9Q6PD62 AC011467.4-201ENST00000594891 528 ntBASIC19.35■□□□□ 0.69
CTR9Q6PD62 AL138828.2-201ENST00000615812 383 ntBASIC19.35■□□□□ 0.69
CTR9Q6PD62 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms