Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 AC010331.1-201ENST00000611423 582 ntBASIC15.83■□□□□ 0.12
RNF220Q5VTB9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 PRAL-201ENST00000624952 3286 ntBASIC15.83■□□□□ 0.12
RNF220Q5VTB9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.83■□□□□ 0.12
RNF220Q5VTB9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 AC079776.2-201ENST00000641154 1609 ntBASIC15.83■□□□□ 0.12
RNF220Q5VTB9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.83■□□□□ 0.12
RNF220Q5VTB9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 KRT16P4-201ENST00000453883 522 ntBASIC15.82■□□□□ 0.12
RNF220Q5VTB9 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF220Q5VTB9 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 AL591684.3-201ENST00000605187 298 ntBASIC15.81■□□□□ 0.12
RNF220Q5VTB9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 AC006486.2-201ENST00000624246 2199 ntBASIC15.81■□□□□ 0.12
RNF220Q5VTB9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF220Q5VTB9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms