Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AC245100.3-201ENST00000441281 285 ntBASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 PHKG1P2-201ENST00000457537 863 ntBASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 CD74-212ENST00000524315 584 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 C2orf69P2-201ENST00000562032 1123 ntBASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AGER-206ENST00000375070 1463 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AC026954.1-201ENST00000429771 1293 ntBASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 RN7SL219P-201ENST00000582872 296 ntBASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AC243960.2-201ENST00000600996 747 ntBASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDC42BPAQ5VT25 USE1-206ENST00000595101 1776 ntTSL 2 BASIC24.2■■□□□ 1.47
CDC42BPAQ5VT25 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDC42BPAQ5VT25 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
CDC42BPAQ5VT25 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDC42BPAQ5VT25 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDC42BPAQ5VT25 AL607033.1-201ENST00000623900 1599 ntBASIC24.2■■□□□ 1.47
CDC42BPAQ5VT25 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CDC42BPAQ5VT25 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 AC092933.1-201ENST00000393644 945 ntBASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 EMC4-209ENST00000559421 497 ntTSL 2 BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CDC42BPAQ5VT25 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 FAM86HP-204ENST00000513466 959 ntBASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 AC005052.1-201ENST00000625181 2492 ntBASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
CDC42BPAQ5VT25 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 BRWD1P1-201ENST00000401091 371 ntBASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 CNN2P8-201ENST00000421872 913 ntBASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 OLR1-203ENST00000432556 950 ntTSL 2 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CDC42BPAQ5VT25 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms