Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 RCN1P1-201ENST00000400413 996 ntBASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 AC012615.1-201ENST00000565797 1299 ntBASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 RN7SL850P-201ENST00000579959 291 ntBASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PI4KAP1-204ENST00000612579 1703 ntBASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 AC005622.1-201ENST00000636801 1703 ntBASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 LINC02228-204ENST00000642115 2962 ntBASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
LINC00242Q5T6M2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 AC136621.1-201ENST00000624017 2304 ntBASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 NKAPP1-205ENST00000585790 367 ntBASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 AL139288.1-201ENST00000623748 933 ntBASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
LINC00242Q5T6M2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 AC020658.6-201ENST00000623564 1870 ntBASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
LINC00242Q5T6M2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms