Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 AC004461.1-201ENST00000412461 403 ntBASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 FAM86GP-201ENST00000448322 971 ntBASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.27■□□□□ 0.52
HERC4Q5GLZ8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
HERC4Q5GLZ8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
HERC4Q5GLZ8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HERC4Q5GLZ8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.27■□□□□ 0.51
HERC4Q5GLZ8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HERC4Q5GLZ8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HERC4Q5GLZ8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HERC4Q5GLZ8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 WASH6P-202ENST00000359512 1437 ntBASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 AC109322.1-201ENST00000524499 1264 ntBASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 AC091812.2-201ENST00000619081 385 ntBASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 AC105339.1-204ENST00000636249 355 ntBASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HERC4Q5GLZ8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC4Q5GLZ8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.25■□□□□ 0.51
HERC4Q5GLZ8 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HERC4Q5GLZ8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HERC4Q5GLZ8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.25■□□□□ 0.51
HERC4Q5GLZ8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms